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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2810Branched-chain amino acid ABC transporter substrate-binding protein. (242 aa)    
Predicted Functional Partners:
yecS
Transporter subunit: permease component of ABC superfamily transporter.
    
 0.766
glnQ
ABC transporter ATP-binding protein.
   
 
 0.722
potD
Spermidine/putrescine-binding periplasmic protein precursor potD (SPBP); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
     
 0.715
evgS_2
Sensor histidine kinase.
   
 0.670
add_2
Adenosine deaminase.
       0.541
Lcin_0454
Hypothetical protein.
    
 0.538
fixL_2
Sensor histidine kinase/response regulator LuxN.
    
 0.538
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
  
    0.526
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 
 0.495
ybhF
ABC transporter ATP-binding protein.
   
 
 0.495
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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