Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lcin_0251 | lptC | Lcin_0251 | Lcin_3132 | Methyl-transferase. | Lipopolysaccharide export system protein LptC. | 0.574 |
| Lcin_0251 | rlpB | Lcin_0251 | Lcin_2847 | Methyl-transferase. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.629 |
| holA | leuS | Lcin_2846 | Lcin_2848 | DNA polymerase III, delta subunit. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.512 |
| holA | ostA | Lcin_2846 | Lcin_1731 | DNA polymerase III, delta subunit. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.407 |
| holA | rlpB | Lcin_2846 | Lcin_2847 | DNA polymerase III, delta subunit. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.699 |
| holA | smpA | Lcin_2846 | Lcin_0597 | DNA polymerase III, delta subunit. | Small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.436 |
| leuS | holA | Lcin_2848 | Lcin_2846 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA polymerase III, delta subunit. | 0.512 |
| leuS | rlpB | Lcin_2848 | Lcin_2847 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.920 |
| lptA | lptB | Lcin_3131 | Lcin_3130 | OstA family protein. | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | 0.988 |
| lptA | lptC | Lcin_3131 | Lcin_3132 | OstA family protein. | Lipopolysaccharide export system protein LptC. | 0.998 |
| lptA | lptF | Lcin_3131 | Lcin_0647 | OstA family protein. | Hypothetical protein. | 0.797 |
| lptA | lptG | Lcin_3131 | Lcin_0646 | OstA family protein. | Hypothetical protein. | 0.798 |
| lptA | ostA | Lcin_3131 | Lcin_1731 | OstA family protein. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.965 |
| lptA | rlpB | Lcin_3131 | Lcin_2847 | OstA family protein. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.775 |
| lptB | lptA | Lcin_3130 | Lcin_3131 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | OstA family protein. | 0.988 |
| lptB | lptC | Lcin_3130 | Lcin_3132 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | Lipopolysaccharide export system protein LptC. | 0.998 |
| lptB | lptF | Lcin_3130 | Lcin_0647 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | Hypothetical protein. | 0.993 |
| lptB | lptG | Lcin_3130 | Lcin_0646 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | Hypothetical protein. | 0.995 |
| lptB | ostA | Lcin_3130 | Lcin_1731 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.789 |
| lptB | rlpB | Lcin_3130 | Lcin_2847 | Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.753 |
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