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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsKDNA translocase FtsK. (791 aa)    
Predicted Functional Partners:
Lcin_1003
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
    
 
 0.837
Lcin_1793
NHL repeat protein.
    
 
 0.837
bprV_3
Serine protease; Belongs to the peptidase S8 family.
    
 
 0.837
ycaJ
Recombination protein.
 
    0.834
lolA
Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
  
 0.831
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
   
 
 0.813
parB_3
Partition protein ParB; Belongs to the ParB family.
  
   
 0.731
parB_1
Chromosome partitioning protein parB; Belongs to the ParB family.
  
   
 0.728
parB_2
Chromosome partitioning protein parB; Belongs to the ParB family.
  
   
 0.727
parA_1
Chromosome partitioning protein ParA.
  
  
 0.615
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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