STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2908Hypothetical protein; Belongs to the UPF0276 family. (287 aa)    
Predicted Functional Partners:
Lcin_2909
Hypothetical protein.
 
  
 0.985
Lcin_3224
Signal peptide protein.
 
  
 0.934
Lcin_3249
Hypothetical protein.
 
  
 0.934
Lcin_2907
Silver efflux pump.
 
     0.897
Lcin_3247
Signal peptide protein.
 
  
 0.870
celC
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
    0.605
Lcin_1615
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.437
yceI
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.422
yceI_2
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.422
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.