STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2972Cupin domain protein. (160 aa)    
Predicted Functional Partners:
purM
Phosphoribosylformylglycinamidine cyclo ligase.
     
  0.549
purC
Phosphoribosylamidoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
     
  0.549
Lcin_2971
Transcriptional regulator-like protein.
 
     0.539
Lcin_2973
Hypothetical protein.
       0.532
mhpA
FAD monooxygenase, PheA/TfdB family.
       0.532
Lcin_2975
Pyoverdine biosynthesis protein PvcB.
       0.532
Lcin_2642
Hypothetical protein.
  
     0.506
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
  0.490
Lcin_2976
Pyoverdine biosynthesis protein PvcA.
       0.485
Lcin_0181
Hemoglobin (protozoan/cyanobacterial globin family).
  
     0.473
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.