dbpA_2 protein (Legionella cincinnatiensis) - STRING interaction network

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Score

dbpA_2

ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. (468 aa)

Predicted Functional Partners:

ppiB

0.888

yjeF

0.872

pnp

0.857

fusA_1

0.819

fusA_2

0.819

Lcin_3030

0.816

rplD

0.805

Lcin_2239

0.805

rplC

0.790

rpsA

0.776

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_2239	Lcin_3030	Lcin_2239	Lcin_3030	Hypothetical protein.	RNA binding protein, cold-inducible rrm.	0.884
Lcin_2239	dbpA_2	Lcin_2239	Lcin_3029	Hypothetical protein.	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	0.805
Lcin_2239	ppiB	Lcin_2239	Lcin_0729	Hypothetical protein.	Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.879
Lcin_2239	rplC	Lcin_2239	Lcin_0641	Hypothetical protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.915
Lcin_2239	rplD	Lcin_2239	Lcin_0640	Hypothetical protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.889
Lcin_3030	Lcin_2239	Lcin_3030	Lcin_2239	RNA binding protein, cold-inducible rrm.	Hypothetical protein.	0.884
Lcin_3030	dbpA_2	Lcin_3030	Lcin_3029	RNA binding protein, cold-inducible rrm.	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	0.816
Lcin_3030	fusA_1	Lcin_3030	Lcin_1567	RNA binding protein, cold-inducible rrm.	Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.645
Lcin_3030	fusA_2	Lcin_3030	Lcin_3180	RNA binding protein, cold-inducible rrm.	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	0.645
Lcin_3030	ppiB	Lcin_3030	Lcin_0729	RNA binding protein, cold-inducible rrm.	Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.559
dbpA_2	Lcin_2239	Lcin_3029	Lcin_2239	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Hypothetical protein.	0.805
dbpA_2	Lcin_3030	Lcin_3029	Lcin_3030	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	RNA binding protein, cold-inducible rrm.	0.816
dbpA_2	fusA_1	Lcin_3029	Lcin_1567	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.819
dbpA_2	fusA_2	Lcin_3029	Lcin_3180	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	0.819
dbpA_2	pnp	Lcin_3029	Lcin_0758	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.857
dbpA_2	ppiB	Lcin_3029	Lcin_0729	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.888
dbpA_2	rplC	Lcin_3029	Lcin_0641	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.790
dbpA_2	rplD	Lcin_3029	Lcin_0640	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.805
dbpA_2	rpsA	Lcin_3029	Lcin_3292	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.776
dbpA_2	yjeF	Lcin_3029	Lcin_0709	ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.	Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]	0.872