STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpX_3Protease HtpX. (1564 aa)    
Predicted Functional Partners:
Lcin_0508
Hypothetical protein.
  
  
  0.822
Lcin_2419
Dihydroorotate dehydrogenase electron transfer subunit.
  
     0.770
Lcin_1503
Putative Glutathione synthetase ATP-binding domain-like protein.
 
     0.762
Lcin_1005
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
  
     0.761
dsbG
NHL repeat protein.
 
     0.756
Lcin_0095
PPR repeat protein.
    
 0.743
Lcin_0579
PPR repeat protein.
    
 0.743
Lcin_0273
3-deoxy-D-manno-octulosonic-acid kinase.
  
     0.735
sseJ_1
Phospholipase/lecithinase/hemolysin.
  
     0.716
ycdT
Regulatory protein (GGDEF domain).
    
 0.713
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.