Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcin_0402 | Lcin_0957 | Lcin_0402 | Lcin_0957 | Hypothetical protein. | Ankyrin repeat protein. | 0.790 |
Lcin_0402 | noc | Lcin_0402 | Lcin_1496 | Hypothetical protein. | Nucleoid occlusion protein; Belongs to the ParB family. | 0.803 |
Lcin_0402 | traC_1 | Lcin_0402 | Lcin_3054 | Hypothetical protein. | DNA primase traC. | 0.703 |
Lcin_0402 | traF | Lcin_0402 | Lcin_3056 | Hypothetical protein. | Conjugal transfer protein TraF. | 0.765 |
Lcin_0402 | traI | Lcin_0402 | Lcin_3052 | Hypothetical protein. | TraI protein. | 0.805 |
Lcin_0402 | traI_3 | Lcin_0402 | Lcin_1467 | Hypothetical protein. | Putative conjugative transfer protein TraI. | 0.806 |
Lcin_0402 | traJ | Lcin_0402 | Lcin_3051 | Hypothetical protein. | TraJ protein. | 0.758 |
Lcin_0402 | traL_1 | Lcin_0402 | Lcin_3049 | Hypothetical protein. | traL protein. | 0.698 |
Lcin_0957 | Lcin_0402 | Lcin_0957 | Lcin_0402 | Ankyrin repeat protein. | Hypothetical protein. | 0.790 |
Lcin_0957 | noc | Lcin_0957 | Lcin_1496 | Ankyrin repeat protein. | Nucleoid occlusion protein; Belongs to the ParB family. | 0.770 |
Lcin_0957 | traC_1 | Lcin_0957 | Lcin_3054 | Ankyrin repeat protein. | DNA primase traC. | 0.672 |
Lcin_0957 | traF | Lcin_0957 | Lcin_3056 | Ankyrin repeat protein. | Conjugal transfer protein TraF. | 0.757 |
Lcin_0957 | traI | Lcin_0957 | Lcin_3052 | Ankyrin repeat protein. | TraI protein. | 0.784 |
Lcin_0957 | traI_3 | Lcin_0957 | Lcin_1467 | Ankyrin repeat protein. | Putative conjugative transfer protein TraI. | 0.790 |
Lcin_0957 | traJ | Lcin_0957 | Lcin_3051 | Ankyrin repeat protein. | TraJ protein. | 0.747 |
Lcin_0957 | traL_1 | Lcin_0957 | Lcin_3049 | Ankyrin repeat protein. | traL protein. | 0.676 |
noc | Lcin_0402 | Lcin_1496 | Lcin_0402 | Nucleoid occlusion protein; Belongs to the ParB family. | Hypothetical protein. | 0.803 |
noc | Lcin_0957 | Lcin_1496 | Lcin_0957 | Nucleoid occlusion protein; Belongs to the ParB family. | Ankyrin repeat protein. | 0.770 |
noc | traC_1 | Lcin_1496 | Lcin_3054 | Nucleoid occlusion protein; Belongs to the ParB family. | DNA primase traC. | 0.729 |
noc | traF | Lcin_1496 | Lcin_3056 | Nucleoid occlusion protein; Belongs to the ParB family. | Conjugal transfer protein TraF. | 0.763 |
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