Lcin_3063 protein (Legionella cincinnatiensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Score

Lcin_3063

Mammalian cell entry related domain protein. (300 aa)

Predicted Functional Partners:

mlaE

0.997

Lcin_3062

0.997

Lcin_3064

0.987

ttg2D

0.959

yrbF

0.956

yrbE

0.954

Lcin_3139

0.915

yrbD

0.848

pal

0.778

Lcin_2126

0.754

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_2126	Lcin_3062	Lcin_2126	Lcin_3062	ABC transporter permease.	ABC transporter ATP-binding protein.	0.896
Lcin_2126	Lcin_3063	Lcin_2126	Lcin_3063	ABC transporter permease.	Mammalian cell entry related domain protein.	0.754
Lcin_2126	Lcin_3139	Lcin_2126	Lcin_3139	ABC transporter permease.	Anti-anti-sigma factor.	0.668
Lcin_2126	ttg2D	Lcin_2126	Lcin_3138	ABC transporter permease.	Toluene tolerance protein Ttg2D.	0.458
Lcin_2126	yrbD	Lcin_2126	Lcin_3137	ABC transporter permease.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.745
Lcin_2126	yrbF	Lcin_2126	Lcin_3135	ABC transporter permease.	Toluene transporter subunit: ATP-binding component of ABC superfamily protein.	0.896
Lcin_3062	Lcin_2126	Lcin_3062	Lcin_2126	ABC transporter ATP-binding protein.	ABC transporter permease.	0.896
Lcin_3062	Lcin_3063	Lcin_3062	Lcin_3063	ABC transporter ATP-binding protein.	Mammalian cell entry related domain protein.	0.997
Lcin_3062	Lcin_3064	Lcin_3062	Lcin_3064	ABC transporter ATP-binding protein.	Transport protein.	0.931
Lcin_3062	Lcin_3139	Lcin_3062	Lcin_3139	ABC transporter ATP-binding protein.	Anti-anti-sigma factor.	0.975
Lcin_3062	mlaE	Lcin_3062	Lcin_3061	ABC transporter ATP-binding protein.	ABC transporter permease.	0.999
Lcin_3062	pal	Lcin_3062	Lcin_3065	ABC transporter ATP-binding protein.	Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.733
Lcin_3062	ttg2D	Lcin_3062	Lcin_3138	ABC transporter ATP-binding protein.	Toluene tolerance protein Ttg2D.	0.895
Lcin_3062	yrbD	Lcin_3062	Lcin_3137	ABC transporter ATP-binding protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.987
Lcin_3062	yrbE	Lcin_3062	Lcin_3136	ABC transporter ATP-binding protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.992
Lcin_3062	yrbF	Lcin_3062	Lcin_3135	ABC transporter ATP-binding protein.	Toluene transporter subunit: ATP-binding component of ABC superfamily protein.	0.848
Lcin_3063	Lcin_2126	Lcin_3063	Lcin_2126	Mammalian cell entry related domain protein.	ABC transporter permease.	0.754
Lcin_3063	Lcin_3062	Lcin_3063	Lcin_3062	Mammalian cell entry related domain protein.	ABC transporter ATP-binding protein.	0.997
Lcin_3063	Lcin_3064	Lcin_3063	Lcin_3064	Mammalian cell entry related domain protein.	Transport protein.	0.987
Lcin_3063	Lcin_3139	Lcin_3063	Lcin_3139	Mammalian cell entry related domain protein.	Anti-anti-sigma factor.	0.915