STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iraBHypothetical protein. (500 aa)    
Predicted Functional Partners:
dtpA_2
Proton-dependent oligopeptide transporter (POT family).
  
     0.774
iraA
Small-molecule methyltransferase IraA.
       0.678
Lcin_3077
Ankyrin repeat protein.
   
   0.550
Lcin_2314
Zinc-iron permease (ZIP) family metal cation transporter.
  
 
 
 0.549
wecA
alpha-N-acetylglucosaminyltransferase.
       0.491
galE
UDP-glucose 4-epimerase.
       0.482
yveA_3
Amino acid permease.
  
 
   0.461
lysP
Amino acid (lysine) permease.
  
     0.460
Lcin_3114
Protein-tyrosine phosphatase.
  
     0.439
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.