yrbF protein (Legionella cincinnatiensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

yrbF

Toluene transporter subunit: ATP-binding component of ABC superfamily protein. (265 aa)

Predicted Functional Partners:

yrbE

0.997

yrbD

0.997

mlaE

0.979

Lcin_3139

0.940

ttg2D

0.928

Lcin_2126

0.922

Lcin_3063

0.887

Lcin_2125

0.848

Lcin_3062

0.612

lptB

0.604

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_2125	Lcin_2126	Lcin_2125	Lcin_2126	Putative transmembrane protein.	ABC transporter permease.	0.961
Lcin_2125	Lcin_3062	Lcin_2125	Lcin_3062	Putative transmembrane protein.	ABC transporter ATP-binding protein.	0.848
Lcin_2125	Lcin_3139	Lcin_2125	Lcin_3139	Putative transmembrane protein.	Anti-anti-sigma factor.	0.670
Lcin_2125	mlaE	Lcin_2125	Lcin_3061	Putative transmembrane protein.	ABC transporter permease.	0.834
Lcin_2125	ttg2D	Lcin_2125	Lcin_3138	Putative transmembrane protein.	Toluene tolerance protein Ttg2D.	0.824
Lcin_2125	yrbD	Lcin_2125	Lcin_3137	Putative transmembrane protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.488
Lcin_2125	yrbE	Lcin_2125	Lcin_3136	Putative transmembrane protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.834
Lcin_2125	yrbF	Lcin_2125	Lcin_3135	Putative transmembrane protein.	Toluene transporter subunit: ATP-binding component of ABC superfamily protein.	0.848
Lcin_2126	Lcin_2125	Lcin_2126	Lcin_2125	ABC transporter permease.	Putative transmembrane protein.	0.961
Lcin_2126	Lcin_3062	Lcin_2126	Lcin_3062	ABC transporter permease.	ABC transporter ATP-binding protein.	0.922
Lcin_2126	Lcin_3063	Lcin_2126	Lcin_3063	ABC transporter permease.	Mammalian cell entry related domain protein.	0.829
Lcin_2126	Lcin_3139	Lcin_2126	Lcin_3139	ABC transporter permease.	Anti-anti-sigma factor.	0.653
Lcin_2126	ttg2D	Lcin_2126	Lcin_3138	ABC transporter permease.	Toluene tolerance protein Ttg2D.	0.473
Lcin_2126	yrbD	Lcin_2126	Lcin_3137	ABC transporter permease.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.824
Lcin_2126	yrbF	Lcin_2126	Lcin_3135	ABC transporter permease.	Toluene transporter subunit: ATP-binding component of ABC superfamily protein.	0.922
Lcin_3062	Lcin_2125	Lcin_3062	Lcin_2125	ABC transporter ATP-binding protein.	Putative transmembrane protein.	0.848
Lcin_3062	Lcin_2126	Lcin_3062	Lcin_2126	ABC transporter ATP-binding protein.	ABC transporter permease.	0.922
Lcin_3062	Lcin_3063	Lcin_3062	Lcin_3063	ABC transporter ATP-binding protein.	Mammalian cell entry related domain protein.	0.991
Lcin_3062	Lcin_3139	Lcin_3062	Lcin_3139	ABC transporter ATP-binding protein.	Anti-anti-sigma factor.	0.756
Lcin_3062	mlaE	Lcin_3062	Lcin_3061	ABC transporter ATP-binding protein.	ABC transporter permease.	0.997