Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ttg2DToluene tolerance protein Ttg2D. (203 aa)    
Predicted Functional Partners:
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.999
Lcin_3139
Anti-anti-sigma factor.
  
 
 0.994
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 
 0.984
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
 
 
 0.982
mlaA
Lipoprotein VacJ-like protein.
 
 
 
 0.962
Lcin_3063
Mammalian cell entry related domain protein.
  
 0.959
Lcin_3062
ABC transporter ATP-binding protein.
  
 
 0.895
mlaE
ABC transporter permease.
  
 
 0.894
Lcin_2125
Putative transmembrane protein.
 
 0.879
lptA
OstA family protein.
  
  
 0.743
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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