Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_3198General secretion pathway protein. (160 aa)    
Predicted Functional Partners:
Lcin_3199
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.980
mltB_2
Membrane-bound lytic murein transglycosylase B.
       0.840
Lcin_1360
General secretion pathway protein C.
 
   
 0.806
lspK
Type II secretory pathway protein LspK.
 
  
 0.789
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.780
lspI
Type II secretory pathway protein LspI.
 
   
 0.749
lspH
Type II secretory pathway protein LspH.
 
   
 0.737
ydgA
Putative membrane protein YdgA-like protein.
  
     0.733
Lcin_3155
Ankyrin repeats (3 copies).
  
     0.726
Lcin_1163
Putative virulence protein.
  
     0.709
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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