STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adc_2Acetoacetate decarboxylase. (246 aa)    
Predicted Functional Partners:
bdhA
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.852
Lcin_1161
Patatin-like phospholipase.
 
     0.717
Lcin_2881
Patatin-like phospholipase.
 
     0.710
Lcin_2415
Patatin-like phospholipase.
 
     0.682
mvaB
hydroxymethylglutaryl-CoA lyase.
     
  0.551
acsA
acetyl-CoA synthetase.
     
  0.551
rkpA
Type I polyketide synthase WcbR.
     
  0.462
bphI
4-hydroxy-2-oxovalerate aldolase.
     
  0.414
adh
Threonine(-3-)dehydrogenase.
     
  0.412
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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