Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lcin_0503 | Lcin_1849 | Lcin_0503 | Lcin_1849 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
| Lcin_0503 | gcvH | Lcin_0503 | Lcin_2625 | Saframycin Mx1 synthetase B. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.702 |
| Lcin_0503 | lssX | Lcin_0503 | Lcin_3264 | Saframycin Mx1 synthetase B. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.806 |
| Lcin_0503 | pksM | Lcin_0503 | Lcin_2790 | Saframycin Mx1 synthetase B. | Polyketide synthase. | 0.980 |
| Lcin_0503 | rkpA | Lcin_0503 | Lcin_0960 | Saframycin Mx1 synthetase B. | Type I polyketide synthase WcbR. | 0.988 |
| Lcin_0503 | tycC_2 | Lcin_0503 | Lcin_1179 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthase. | 0.999 |
| Lcin_1849 | Lcin_0503 | Lcin_1849 | Lcin_0503 | acyl-CoA synthetase. | Saframycin Mx1 synthetase B. | 0.999 |
| Lcin_1849 | gcvH | Lcin_1849 | Lcin_2625 | acyl-CoA synthetase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.532 |
| Lcin_1849 | lssX | Lcin_1849 | Lcin_3264 | acyl-CoA synthetase. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.721 |
| Lcin_1849 | pksM | Lcin_1849 | Lcin_2790 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
| Lcin_1849 | rkpA | Lcin_1849 | Lcin_0960 | acyl-CoA synthetase. | Type I polyketide synthase WcbR. | 0.999 |
| Lcin_1849 | tycC_2 | Lcin_1849 | Lcin_1179 | acyl-CoA synthetase. | Non-ribosomal peptide synthase. | 0.999 |
| Lcin_3263 | dacA | Lcin_3263 | Lcin_3262 | Hypothetical protein; Belongs to the UPF0250 family. | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | 0.782 |
| Lcin_3263 | lssX | Lcin_3263 | Lcin_3264 | Hypothetical protein; Belongs to the UPF0250 family. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.866 |
| Lcin_3263 | lssY | Lcin_3263 | Lcin_3265 | Hypothetical protein; Belongs to the UPF0250 family. | Legionella secretion system protein Y. | 0.792 |
| dacA | Lcin_3263 | Lcin_3262 | Lcin_3263 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Hypothetical protein; Belongs to the UPF0250 family. | 0.782 |
| dacA | lssX | Lcin_3262 | Lcin_3264 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.768 |
| dacA | lssY | Lcin_3262 | Lcin_3265 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Legionella secretion system protein Y. | 0.768 |
| gcvH | Lcin_0503 | Lcin_2625 | Lcin_0503 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Saframycin Mx1 synthetase B. | 0.702 |
| gcvH | Lcin_1849 | Lcin_2625 | Lcin_1849 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | acyl-CoA synthetase. | 0.532 |
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