STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpAPhage repressor. (220 aa)    
Predicted Functional Partners:
IvrA
Hypothetical protein.
 
     0.852
Lcin_3241
Hypothetical protein.
  
     0.732
Lcin_2723
Protein LvrA.
 
     0.722
Lcin_0885
6-pyruvoyl tetrahydropterin synthase.
  
     0.702
traE
Type IV conjugative transfer system protein TraE.
 
     0.671
lvrB
Hypothetical protein.
     
 0.613
zipA
Cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.591
Lcin_0935
Putative helicase/relaxase.
  
     0.582
lvrA
Protein LvrA.
 
     0.578
Lcin_3114
Protein-tyrosine phosphatase.
  
     0.577
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.