STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_3382Hypothetical protein. (201 aa)    
Predicted Functional Partners:
evgS_2
Sensor histidine kinase.
    
 0.679
yjbJ_3
Stress response protein; Belongs to the UPF0337 (CsbD) family.
       0.625
Lcin_3384
Hypothetical protein.
       0.583
arcB_4
Sensory box histidine kinase/response regulator.
     
 0.545
arcB_1
Sensory histidine-kinase / response regulator.
     
 0.545
cysK
Cystathionine beta-synthase.
  
 
 0.539
letS
Legionella transmission sensor LetS.
     
 0.530
hipB
Putative DNA-binding transcriptional regulator.
    
  0.438
Lcin_3381
Hypothetical protein.
       0.427
cc4
Cytochrome c4.
     
  0.425
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.