Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_3412Metal-sulfur cluster biosynthetic enzyme. (111 aa)    
Predicted Functional Partners:
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
 
  
 0.928
nifU
NifU family FeS assembly SUF system protein.
 
    0.917
sufD
Component of SufBCD complex.
 
   
 0.914
sufB
Cysteine desulfurase.
 
   
 0.903
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.878
poxA
lysyl-tRNA synthetase.
       0.840
nsrR_2
Rrf2 family transporter protein.
     
 0.747
xylA
Xylene monooxygenase.
  
 
 0.694
Lcin_2874
Putative iron-sulpher cluster proteins NifU.
  
    0.672
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.664
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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