STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsrR_2Rrf2 family transporter protein. (153 aa)    
Predicted Functional Partners:
nifU
NifU family FeS assembly SUF system protein.
 
 
 0.990
iscS
Cysteine desulfurase.
  
 
 0.972
sufD
Component of SufBCD complex.
 
   
 0.850
sufB
Cysteine desulfurase.
 
   
 0.848
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
  0.823
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
     
 0.810
Lcin_2874
Putative iron-sulpher cluster proteins NifU.
  
 
 0.706
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.704
nsrR
DNA-binding transcriptional regulator.
  
   
 0.669
poxA
lysyl-tRNA synthetase.
 
     0.637
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.