STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_3442Hypothetical protein. (54 aa)    
Predicted Functional Partners:
evgS_2
Sensor histidine kinase.
   
 0.650
arcB_4
Sensory box histidine kinase/response regulator.
   
 0.604
arcB_1
Sensory histidine-kinase / response regulator.
   
 0.604
gmr_3
Regulatory protein (GGDEF domain).
     
 0.560
letS
Legionella transmission sensor LetS.
   
  0.557
Lcin_3402
LuxR family transcriptional regulator.
  
  0.554
sidJ
Substrate of the Dot/Icm secretion system.
    
   0.450
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.443
yhiN
Oxidoreductase with FAD/NAD(P)-binding domain protein.
       0.438
bcp
Acetylpolyamine aminohydrolase.
    
  0.433
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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