STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxA_1Sensor histidine kinase. (537 aa)    
Predicted Functional Partners:
Lsai_1704
Sensory box histidine kinase/response regulator.
 
 
 0.945
Lsai_3119
Sensory histidine-kinase / response regulator.
 
 
 0.942
cpxR_1
Transcriptional regulatory protein CpxR.
 
 
 0.839
cpxR_3
Transcriptional regulatory protein CpxR.
 
 
 0.828
Lsai_1861
Sensory box histidine kinase/response regulator.
 
 
 0.828
cpxR_2
Transcriptional regulatory protein CpxR.
 
 
 0.810
Lsai_3396
Sensor histidine kinase.
 
 
0.805
ompR
DNA-binding response regulator in two-component regulatory system with EnvZ.
 
 
 0.804
Lsai_1621
Hypothetical protein.
  
 
 0.763
lrpR
DNA-binding response regulator.
 
 
 0.748
Your Current Organism:
Legionella sainthelensi
NCBI taxonomy Id: 28087
Other names: ATCC 35248, CCUG 29672, CIP 103885, DSM 19231, L. sainthelensi, NCTC 11988, strain MSH-4, strain Mt. St. Helens 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.