Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsai_0578 | Lsai_0579 | Lsai_0578 | Lsai_0579 | Hypothetical protein. | Bacterioferritin. | 0.559 |
Lsai_0578 | Lsai_2867 | Lsai_0578 | Lsai_2867 | Hypothetical protein. | Cytochrome c type biogenesis protein CycH. | 0.404 |
Lsai_0578 | Lsai_3430 | Lsai_0578 | Lsai_3430 | Hypothetical protein. | Erythromycin esterase. | 0.471 |
Lsai_0578 | Lsai_3431 | Lsai_0578 | Lsai_3431 | Hypothetical protein. | Erythromycin esterase. | 0.456 |
Lsai_0578 | yjgR | Lsai_0578 | Lsai_0577 | Hypothetical protein. | ATPase. | 0.410 |
Lsai_0579 | Lsai_0578 | Lsai_0579 | Lsai_0578 | Bacterioferritin. | Hypothetical protein. | 0.559 |
Lsai_2867 | Lsai_0578 | Lsai_2867 | Lsai_0578 | Cytochrome c type biogenesis protein CycH. | Hypothetical protein. | 0.404 |
Lsai_3430 | Lsai_0578 | Lsai_3430 | Lsai_0578 | Erythromycin esterase. | Hypothetical protein. | 0.471 |
Lsai_3430 | Lsai_3431 | Lsai_3430 | Lsai_3431 | Erythromycin esterase. | Erythromycin esterase. | 0.993 |
Lsai_3431 | Lsai_0578 | Lsai_3431 | Lsai_0578 | Erythromycin esterase. | Hypothetical protein. | 0.456 |
Lsai_3431 | Lsai_3430 | Lsai_3431 | Lsai_3430 | Erythromycin esterase. | Erythromycin esterase. | 0.993 |
yjgR | Lsai_0578 | Lsai_0577 | Lsai_0578 | ATPase. | Hypothetical protein. | 0.410 |