Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsai_0648 | yjbJ_1 | Lsai_0648 | Lsai_0649 | Hypothetical protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.427 |
Lsai_0650 | yjbJ_1 | Lsai_0650 | Lsai_0649 | PRC-barrel domain protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.701 |
Lsai_1375 | yjbJ_1 | Lsai_1375 | Lsai_0649 | Phospholipid binding protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.468 |
Lsai_1544 | osmY_1 | Lsai_1544 | Lsai_2053 | Transmembrane protein. | Lipoprotein. | 0.643 |
Lsai_1544 | yjbJ_1 | Lsai_1544 | Lsai_0649 | Transmembrane protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.662 |
Lsai_1712 | Lsai_1713 | Lsai_1712 | Lsai_1713 | Putative lipoprotein. | Hemolysin, lipoprotein. | 0.827 |
Lsai_1712 | yjbJ_1 | Lsai_1712 | Lsai_0649 | Putative lipoprotein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.468 |
Lsai_1713 | Lsai_1712 | Lsai_1713 | Lsai_1712 | Hemolysin, lipoprotein. | Putative lipoprotein. | 0.827 |
Lsai_1713 | yjbJ_1 | Lsai_1713 | Lsai_0649 | Hemolysin, lipoprotein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.468 |
Lsai_3164 | osmY_1 | Lsai_3164 | Lsai_2053 | Transmembrane protein. | Lipoprotein. | 0.643 |
Lsai_3164 | yjbJ_1 | Lsai_3164 | Lsai_0649 | Transmembrane protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.634 |
Lsai_3203 | yjbJ_1 | Lsai_3203 | Lsai_0649 | Hypothetical protein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.554 |
osmY_1 | Lsai_1544 | Lsai_2053 | Lsai_1544 | Lipoprotein. | Transmembrane protein. | 0.643 |
osmY_1 | Lsai_3164 | Lsai_2053 | Lsai_3164 | Lipoprotein. | Transmembrane protein. | 0.643 |
osmY_1 | yjbJ_1 | Lsai_2053 | Lsai_0649 | Lipoprotein. | Stress response protein; Belongs to the UPF0337 (CsbD) family. | 0.731 |
yjbJ_1 | Lsai_0648 | Lsai_0649 | Lsai_0648 | Stress response protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.427 |
yjbJ_1 | Lsai_0650 | Lsai_0649 | Lsai_0650 | Stress response protein; Belongs to the UPF0337 (CsbD) family. | PRC-barrel domain protein. | 0.701 |
yjbJ_1 | Lsai_1375 | Lsai_0649 | Lsai_1375 | Stress response protein; Belongs to the UPF0337 (CsbD) family. | Phospholipid binding protein. | 0.468 |
yjbJ_1 | Lsai_1544 | Lsai_0649 | Lsai_1544 | Stress response protein; Belongs to the UPF0337 (CsbD) family. | Transmembrane protein. | 0.662 |
yjbJ_1 | Lsai_1712 | Lsai_0649 | Lsai_1712 | Stress response protein; Belongs to the UPF0337 (CsbD) family. | Putative lipoprotein. | 0.468 |
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