Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsai_0908 | Lsai_0909 | Lsai_0908 | Lsai_0909 | O-antigen acetylase. | Lipopolysaccharide biosynthesis protein. | 0.768 |
Lsai_0908 | Lsai_0910 | Lsai_0908 | Lsai_0910 | O-antigen acetylase. | Hypothetical protein. | 0.424 |
Lsai_0908 | wcfH_1 | Lsai_0908 | Lsai_0911 | O-antigen acetylase. | Deacetylase. | 0.433 |
Lsai_0909 | Lsai_0908 | Lsai_0909 | Lsai_0908 | Lipopolysaccharide biosynthesis protein. | O-antigen acetylase. | 0.768 |
Lsai_0909 | Lsai_0910 | Lsai_0909 | Lsai_0910 | Lipopolysaccharide biosynthesis protein. | Hypothetical protein. | 0.450 |
Lsai_0909 | Lsai_0912 | Lsai_0909 | Lsai_0912 | Lipopolysaccharide biosynthesis protein. | Glycosyl transferase, family 2. | 0.440 |
Lsai_0909 | Lsai_0914 | Lsai_0909 | Lsai_0914 | Lipopolysaccharide biosynthesis protein. | Glycosyltransferase, lipopolysaccharide biosynthesis protein. | 0.517 |
Lsai_0909 | wcfH_1 | Lsai_0909 | Lsai_0911 | Lipopolysaccharide biosynthesis protein. | Deacetylase. | 0.469 |
Lsai_0910 | Lsai_0908 | Lsai_0910 | Lsai_0908 | Hypothetical protein. | O-antigen acetylase. | 0.424 |
Lsai_0910 | Lsai_0909 | Lsai_0910 | Lsai_0909 | Hypothetical protein. | Lipopolysaccharide biosynthesis protein. | 0.450 |
Lsai_0910 | Lsai_0912 | Lsai_0910 | Lsai_0912 | Hypothetical protein. | Glycosyl transferase, family 2. | 0.511 |
Lsai_0910 | Lsai_0913 | Lsai_0910 | Lsai_0913 | Hypothetical protein. | Hypothetical protein. | 0.511 |
Lsai_0910 | Lsai_0914 | Lsai_0910 | Lsai_0914 | Hypothetical protein. | Glycosyltransferase, lipopolysaccharide biosynthesis protein. | 0.438 |
Lsai_0910 | lysAC | Lsai_0910 | Lsai_2917 | Hypothetical protein. | Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.450 |
Lsai_0910 | wcfH_1 | Lsai_0910 | Lsai_0911 | Hypothetical protein. | Deacetylase. | 0.783 |
Lsai_0912 | Lsai_0909 | Lsai_0912 | Lsai_0909 | Glycosyl transferase, family 2. | Lipopolysaccharide biosynthesis protein. | 0.440 |
Lsai_0912 | Lsai_0910 | Lsai_0912 | Lsai_0910 | Glycosyl transferase, family 2. | Hypothetical protein. | 0.511 |
Lsai_0912 | Lsai_0913 | Lsai_0912 | Lsai_0913 | Glycosyl transferase, family 2. | Hypothetical protein. | 0.788 |
Lsai_0912 | Lsai_0914 | Lsai_0912 | Lsai_0914 | Glycosyl transferase, family 2. | Glycosyltransferase, lipopolysaccharide biosynthesis protein. | 0.732 |
Lsai_0912 | wcfH_1 | Lsai_0912 | Lsai_0911 | Glycosyl transferase, family 2. | Deacetylase. | 0.537 |
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