STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJ_2Stress response protein; Belongs to the UPF0337 (CsbD) family. (102 aa)    
Predicted Functional Partners:
osmY_1
Lipoprotein.
 
  
 0.731
Lsai_1350
Hypothetical protein.
       0.717
Lsai_1544
Transmembrane protein.
 
    0.664
Lsai_3164
Transmembrane protein.
 
    0.630
Lsai_3203
Hypothetical protein.
  
    0.554
Lsai_1352
Hypothetical protein.
  
    0.473
Lsai_1375
Phospholipid binding protein.
  
    0.468
Lsai_1712
Putative lipoprotein.
  
    0.468
Lsai_1713
Hemolysin, lipoprotein.
  
    0.468
Lsai_1349
Hypothetical protein.
  
    0.447
Your Current Organism:
Legionella sainthelensi
NCBI taxonomy Id: 28087
Other names: ATCC 35248, CCUG 29672, CIP 103885, DSM 19231, L. sainthelensi, NCTC 11988, strain MSH-4, strain Mt. St. Helens 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.