Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lsai_2001Oxydoreductase. (232 aa)    
Predicted Functional Partners:
Lsai_2000
Deoxyribodipyrimidine photolyase-related protein.
       0.817
Lsai_1435
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.750
yueD
Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.737
Lsai_0636
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.677
Lsai_2798
Polysaccharide biosynthesis dehydrogenase/reductase.
  
 
   0.581
Lsai_2795
Saframycin Mx1 synthetase B.
  
 
 0.551
Lsai_2002
Hypothetical protein.
       0.521
sdh
Serine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.450
Lsai_0631
Peptide synthetase, non-ribosomal.
  
 
 0.436
Lsai_1658
Non-ribosomal peptide synthetase.
  
 
 0.436
Your Current Organism:
Legionella sainthelensi
NCBI taxonomy Id: 28087
Other names: ATCC 35248, CCUG 29672, CIP 103885, DSM 19231, L. sainthelensi, NCTC 11988, strain MSH-4, strain Mt. St. Helens 4
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