STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsai_2001Oxydoreductase. (232 aa)    
Predicted Functional Partners:
Lsai_1435
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.750
yueD
Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.737
Lsai_2000
Deoxyribodipyrimidine photolyase-related protein.
       0.733
Lsai_0636
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.680
Lsai_2798
Polysaccharide biosynthesis dehydrogenase/reductase.
  
   0.584
Lsai_2002
Hypothetical protein.
       0.521
sdh
Serine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.453
Lsai_2795
Saframycin Mx1 synthetase B.
  
 
 0.440
Lsai_0383
Hypothetical protein.
  
   0.429
Lsai_1659
Peptide synthetase, non-ribosomal.
  
 
 0.417
Your Current Organism:
Legionella sainthelensi
NCBI taxonomy Id: 28087
Other names: ATCC 35248, CCUG 29672, CIP 103885, DSM 19231, L. sainthelensi, NCTC 11988, strain MSH-4, strain Mt. St. Helens 4
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.