Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsai_2295 | Lsai_2300 | Lsai_2295 | Lsai_2300 | Transporting ATPase. | Cupin. | 0.446 |
Lsai_2295 | mnmC | Lsai_2295 | Lsai_3234 | Transporting ATPase. | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.411 |
Lsai_2295 | poxA | Lsai_2295 | Lsai_1845 | Transporting ATPase. | lysyl-tRNA synthetase. | 0.418 |
Lsai_2295 | ydfJ | Lsai_2295 | Lsai_2294 | Transporting ATPase. | Membrane protein YdfJ. | 0.585 |
Lsai_2295 | yjeK | Lsai_2295 | Lsai_0693 | Transporting ATPase. | Lysine aminomutase. | 0.452 |
Lsai_2300 | Lsai_2295 | Lsai_2300 | Lsai_2295 | Cupin. | Transporting ATPase. | 0.446 |
Lsai_2300 | mnmC | Lsai_2300 | Lsai_3234 | Cupin. | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.577 |
mnmC | Lsai_2295 | Lsai_3234 | Lsai_2295 | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Transporting ATPase. | 0.411 |
mnmC | Lsai_2300 | Lsai_3234 | Lsai_2300 | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Cupin. | 0.577 |
poxA | Lsai_2295 | Lsai_1845 | Lsai_2295 | lysyl-tRNA synthetase. | Transporting ATPase. | 0.418 |
poxA | yjeK | Lsai_1845 | Lsai_0693 | lysyl-tRNA synthetase. | Lysine aminomutase. | 0.818 |
ydfJ | Lsai_2295 | Lsai_2294 | Lsai_2295 | Membrane protein YdfJ. | Transporting ATPase. | 0.585 |
yjeK | Lsai_2295 | Lsai_0693 | Lsai_2295 | Lysine aminomutase. | Transporting ATPase. | 0.452 |
yjeK | poxA | Lsai_0693 | Lsai_1845 | Lysine aminomutase. | lysyl-tRNA synthetase. | 0.818 |