STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIU14357.1Transcriptional regulator, LytR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)    
Predicted Functional Partners:
KIU16533.1
acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.576
KIU14273.1
Thiamine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.548
KIU14370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KIU14358.1
Cysteine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.440
KIU17951.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.413
KIU13672.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.413
KIU15964.1
Protein translocase component YidC; Functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.409
KIU13674.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.408
KIU16705.1
Galactofuranosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.406
KIU15605.1
Primosomal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Mycolicibacterium llatzerense
NCBI taxonomy Id: 280871
Other names: CCUG 54744, CECT 7273, DSM 45343, JCM 16229, M. llatzerense, Mycobacterium llatzerense, Mycobacterium llatzerense Gomila et al. 2008, Mycobacterium sp. 13-009-09768, Mycobacterium sp. MG12, Mycobacterium sp. MG13, Mycobacterium sp. MG14, Mycobacterium sp. MG15, Mycobacterium sp. MG16, Mycobacterium sp. MG18, Mycolicibacterium llatzerense (Gomila et al. 2008) Gupta et al. 2018, strain MG13
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