STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIU13855.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
KIU16410.1
Photosystem I reaction center subunit VIII; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.579
KIU15167.1
Tellurium resistance protein TerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.567
KIU15955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.564
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
 0.541
fgd
Glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
  
  0.534
KIU15989.1
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.530
KIU16854.1
Lectin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.499
KIU13716.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  
 0.483
KIU18926.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.472
KIU18148.1
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.437
Your Current Organism:
Mycolicibacterium llatzerense
NCBI taxonomy Id: 280871
Other names: CCUG 54744, CECT 7273, DSM 45343, JCM 16229, M. llatzerense, Mycobacterium llatzerense, Mycobacterium llatzerense Gomila et al. 2008, Mycobacterium sp. 13-009-09768, Mycobacterium sp. MG12, Mycobacterium sp. MG13, Mycobacterium sp. MG14, Mycobacterium sp. MG15, Mycobacterium sp. MG16, Mycobacterium sp. MG18, Mycolicibacterium llatzerense (Gomila et al. 2008) Gupta et al. 2018, strain MG13
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