STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIU13777.1Isoniazid-inducible protein iniA; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)    
Predicted Functional Partners:
KIU13778.1
Isoniazid-inducible protein iniC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.925
KIU13792.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
KIU13776.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.633
KIU16825.1
Urease accessory protein UreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
KIU16808.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
KIU13779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
KIU13780.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
    
  0.587
KIU16605.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.564
KIU16827.1
Urease accessory protein UreF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
Your Current Organism:
Mycolicibacterium llatzerense
NCBI taxonomy Id: 280871
Other names: CCUG 54744, CECT 7273, DSM 45343, JCM 16229, M. llatzerense, Mycobacterium llatzerense, Mycobacterium llatzerense Gomila et al. 2008, Mycobacterium sp. 13-009-09768, Mycobacterium sp. MG12, Mycobacterium sp. MG13, Mycobacterium sp. MG14, Mycobacterium sp. MG15, Mycobacterium sp. MG16, Mycobacterium sp. MG18, Mycolicibacterium llatzerense (Gomila et al. 2008) Gupta et al. 2018, strain MG13
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.