STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVG18_07335Unannotated protein. (68 aa)    
Predicted Functional Partners:
BVG18_07350
Unannotated protein; Belongs to the 'phage' integrase family.
 
  
 0.573
BVG18_07340
Unannotated protein.
       0.545
BVG18_07330
Unannotated protein.
 
   
 0.517
BVG18_13830
Unannotated protein.
 
 
 0.425
Your Current Organism:
Acinetobacter lwoffii
NCBI taxonomy Id: 28090
Other names: A. lwoffii, ATCC 15309, Acinetobacter genomosp. 8, Acinetobacter genomosp. 9, Acinetobacter genomospecies 8, Acinetobacter genomospecies 9, CCUG 33984, CIP 64.10, CIP:64.10, DSM 2403, JCM 6840, Moraxella lwoffi, NCAIM B.01101, NCCB 73001, NCTC 5866
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.