STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002119785_03322Unannotated protein. (221 aa)    
Predicted Functional Partners:
GCA_002119785_03321
Unannotated protein.
 
  
 0.847
GCA_002119785_00035
Unannotated protein.
 
  
 0.727
GCA_002119785_00361
Unannotated protein.
 
  
 0.724
GCA_002119785_03323
Unannotated protein.
       0.625
BVG18_06550
Unannotated protein.
 
  
0.401
Your Current Organism:
Acinetobacter lwoffii
NCBI taxonomy Id: 28090
Other names: A. lwoffii, ATCC 15309, Acinetobacter genomosp. 8, Acinetobacter genomosp. 9, Acinetobacter genomospecies 8, Acinetobacter genomospecies 9, CCUG 33984, CIP 64.10, CIP:64.10, DSM 2403, JCM 6840, Moraxella lwoffi, NCAIM B.01101, NCCB 73001, NCTC 5866
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.