Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAY50527.1 | SAY50528.1 | SAMEA3174300_00402 | SAMEA3174300_00403 | VacJ-like protein. | Putative transcriptional regulator FolI. | 0.804 |
SAY50527.1 | folC | SAMEA3174300_00402 | SAMEA3174300_00404 | VacJ-like protein. | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | 0.415 |
SAY50527.1 | rep | SAMEA3174300_00402 | SAMEA3174300_00401 | VacJ-like protein. | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | 0.482 |
SAY50528.1 | SAY50527.1 | SAMEA3174300_00403 | SAMEA3174300_00402 | Putative transcriptional regulator FolI. | VacJ-like protein. | 0.804 |
SAY50528.1 | cvpA | SAMEA3174300_00403 | SAMEA3174300_00406 | Putative transcriptional regulator FolI. | Bacteriocin production protein. | 0.469 |
SAY50528.1 | folC | SAMEA3174300_00403 | SAMEA3174300_00404 | Putative transcriptional regulator FolI. | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | 0.626 |
SAY50528.1 | rep | SAMEA3174300_00403 | SAMEA3174300_00401 | Putative transcriptional regulator FolI. | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | 0.482 |
cvpA | SAY50528.1 | SAMEA3174300_00406 | SAMEA3174300_00403 | Bacteriocin production protein. | Putative transcriptional regulator FolI. | 0.469 |
cvpA | folC | SAMEA3174300_00406 | SAMEA3174300_00404 | Bacteriocin production protein. | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | 0.810 |
folC | SAY50527.1 | SAMEA3174300_00404 | SAMEA3174300_00402 | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | VacJ-like protein. | 0.415 |
folC | SAY50528.1 | SAMEA3174300_00404 | SAMEA3174300_00403 | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | Putative transcriptional regulator FolI. | 0.626 |
folC | cvpA | SAMEA3174300_00404 | SAMEA3174300_00406 | Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | Bacteriocin production protein. | 0.810 |
rep | SAY50527.1 | SAMEA3174300_00401 | SAMEA3174300_00402 | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | VacJ-like protein. | 0.482 |
rep | SAY50528.1 | SAMEA3174300_00401 | SAMEA3174300_00403 | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | Putative transcriptional regulator FolI. | 0.482 |