Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SAY51357.1 | SAY51372.1 | SAMEA3174300_01251 | SAMEA3174300_01268 | Uncharacterised ACR, YkgG family COG1556. | Putative oxidoreductase. | 0.755 |
| SAY51357.1 | ackA_1 | SAMEA3174300_01251 | SAMEA3174300_00730 | Uncharacterised ACR, YkgG family COG1556. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.421 |
| SAY51357.1 | ackA_2 | SAMEA3174300_01251 | SAMEA3174300_01351 | Uncharacterised ACR, YkgG family COG1556. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.421 |
| SAY51357.1 | lldP | SAMEA3174300_01251 | SAMEA3174300_01249 | Uncharacterised ACR, YkgG family COG1556. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.745 |
| SAY51357.1 | lutA_1 | SAMEA3174300_01251 | SAMEA3174300_01200 | Uncharacterised ACR, YkgG family COG1556. | Lactate utilization protein A. | 0.682 |
| SAY51357.1 | lutA_2 | SAMEA3174300_01251 | SAMEA3174300_01252 | Uncharacterised ACR, YkgG family COG1556. | Putative Fe-S oxidoreductase. | 0.978 |
| SAY51357.1 | lutB | SAMEA3174300_01251 | SAMEA3174300_01250 | Uncharacterised ACR, YkgG family COG1556. | (Fe-S)-binding protein. | 0.995 |
| SAY51357.1 | pdhR | SAMEA3174300_01251 | SAMEA3174300_01247 | Uncharacterised ACR, YkgG family COG1556. | GntR family transcriptional regulator. | 0.441 |
| SAY51372.1 | SAY51357.1 | SAMEA3174300_01268 | SAMEA3174300_01251 | Putative oxidoreductase. | Uncharacterised ACR, YkgG family COG1556. | 0.755 |
| SAY51372.1 | lldP | SAMEA3174300_01268 | SAMEA3174300_01249 | Putative oxidoreductase. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.678 |
| SAY51372.1 | lutB | SAMEA3174300_01268 | SAMEA3174300_01250 | Putative oxidoreductase. | (Fe-S)-binding protein. | 0.789 |
| ackA_1 | SAY51357.1 | SAMEA3174300_00730 | SAMEA3174300_01251 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Uncharacterised ACR, YkgG family COG1556. | 0.421 |
| ackA_1 | ackA_2 | SAMEA3174300_00730 | SAMEA3174300_01351 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.901 |
| ackA_2 | SAY51357.1 | SAMEA3174300_01351 | SAMEA3174300_01251 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Uncharacterised ACR, YkgG family COG1556. | 0.421 |
| ackA_2 | ackA_1 | SAMEA3174300_01351 | SAMEA3174300_00730 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.901 |
| lldP | SAY51357.1 | SAMEA3174300_01249 | SAMEA3174300_01251 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Uncharacterised ACR, YkgG family COG1556. | 0.745 |
| lldP | SAY51372.1 | SAMEA3174300_01249 | SAMEA3174300_01268 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Putative oxidoreductase. | 0.678 |
| lldP | lutA_2 | SAMEA3174300_01249 | SAMEA3174300_01252 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Putative Fe-S oxidoreductase. | 0.734 |
| lldP | lutB | SAMEA3174300_01249 | SAMEA3174300_01250 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | (Fe-S)-binding protein. | 0.864 |
| lldP | pdhR | SAMEA3174300_01249 | SAMEA3174300_01247 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | GntR family transcriptional regulator. | 0.485 |
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