STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gph_2Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (236 aa)    
Predicted Functional Partners:
ppaX
Phosphatase.
  
  
  0.951
SAY51840.1
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.916
lutA_1
Lactate utilization protein A.
     
  0.900
SAY51308.1
Oxidoreductase, putative.
     
  0.900
SAY51309.1
Oxidoreductase, putative.
     
  0.900
aldA_2
Aldehyde dehydrogenase A; Belongs to the aldehyde dehydrogenase family.
     
  0.900
recX
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
       0.651
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.576
lysC
Aspartate kinase; Belongs to the aspartokinase family.
       0.513
catD
bioH-biotin biosynthesis protein.
  
    0.494
Your Current Organism:
Neisseria weaveri
NCBI taxonomy Id: 28091
Other names: ATCC 51223, ATCC 51410, CCM 4588, CCUG 30799, CCUG 33675, CCUG 4007, CDC 8142, CDC group M-5, CIP 103940, DSM 17688, LMG 5135, LMG:5135, N. weaveri, NCTC 12742, strain ISL775/91
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