STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAY51575.1Putative superfamily II helicase. (578 aa)    
Predicted Functional Partners:
SAY51576.1
Putative prophage DNA primase.
 
     0.841
traC_1
TraC.
     0.772
traL
TraL.
  
     0.587
SAY50817.1
Integrase core domain.
  
     0.571
SAY51415.1
Type IV secretion system T-DNA border endonuclease VirD2.
  
     0.554
SAY50890.1
Putative phage tail completion protein.
  
     0.527
ctrC
Polysialic acid capsule export inner-membrane protein CtrC.
  
     0.518
ctrB
Capsule polysaccharide export inner-membrane protein.
  
     0.500
SAY51333.1
Protein of uncharacterised function (DUF2726).
  
     0.455
fetA
Iron-regulated outer membrane protein FetA.
  
     0.446
Your Current Organism:
Neisseria weaveri
NCBI taxonomy Id: 28091
Other names: ATCC 51223, ATCC 51410, CCM 4588, CCUG 30799, CCUG 33675, CCUG 4007, CDC 8142, CDC group M-5, CIP 103940, DSM 17688, LMG 5135, LMG:5135, N. weaveri, NCTC 12742, strain ISL775/91
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