Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAY51596.1 | acrA | SAMEA3174300_01506 | SAMEA3174300_01509 | Uncharacterised protein. | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.514 |
SAY51596.1 | acrB | SAMEA3174300_01506 | SAMEA3174300_01508 | Uncharacterised protein. | Antibiotic resistance efflux pump component. | 0.515 |
SAY51596.1 | mtrE_2 | SAMEA3174300_01506 | SAMEA3174300_01507 | Uncharacterised protein. | Outer membrane efflux protein. | 0.515 |
acrA | SAY51596.1 | SAMEA3174300_01509 | SAMEA3174300_01506 | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Uncharacterised protein. | 0.514 |
acrA | acrB | SAMEA3174300_01509 | SAMEA3174300_01508 | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Antibiotic resistance efflux pump component. | 0.999 |
acrA | mtrE_2 | SAMEA3174300_01509 | SAMEA3174300_01507 | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane efflux protein. | 0.996 |
acrB | SAY51596.1 | SAMEA3174300_01508 | SAMEA3174300_01506 | Antibiotic resistance efflux pump component. | Uncharacterised protein. | 0.515 |
acrB | acrA | SAMEA3174300_01508 | SAMEA3174300_01509 | Antibiotic resistance efflux pump component. | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.999 |
acrB | mtrE_2 | SAMEA3174300_01508 | SAMEA3174300_01507 | Antibiotic resistance efflux pump component. | Outer membrane efflux protein. | 0.999 |
mtrE_2 | SAY51596.1 | SAMEA3174300_01507 | SAMEA3174300_01506 | Outer membrane efflux protein. | Uncharacterised protein. | 0.515 |
mtrE_2 | acrA | SAMEA3174300_01507 | SAMEA3174300_01509 | Outer membrane efflux protein. | Antibiotic resistance efflux pump component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.996 |
mtrE_2 | acrB | SAMEA3174300_01507 | SAMEA3174300_01508 | Outer membrane efflux protein. | Antibiotic resistance efflux pump component. | 0.999 |