Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAY50372.1 | SAY50527.1 | SAMEA3174300_00243 | SAMEA3174300_00402 | Secreted protein. | VacJ-like protein. | 0.767 |
SAY50372.1 | SAY51793.1 | SAMEA3174300_00243 | SAMEA3174300_01711 | Secreted protein. | VacJ-like protein. | 0.773 |
SAY50372.1 | fadM | SAMEA3174300_00243 | SAMEA3174300_01712 | Secreted protein. | Thioesterase family protein. | 0.447 |
SAY50527.1 | SAY50372.1 | SAMEA3174300_00402 | SAMEA3174300_00243 | VacJ-like protein. | Secreted protein. | 0.767 |
SAY50527.1 | fadM | SAMEA3174300_00402 | SAMEA3174300_01712 | VacJ-like protein. | Thioesterase family protein. | 0.642 |
SAY51791.1 | SAY51793.1 | SAMEA3174300_01709 | SAMEA3174300_01711 | NTP binding protein. | VacJ-like protein. | 0.564 |
SAY51791.1 | fadM | SAMEA3174300_01709 | SAMEA3174300_01712 | NTP binding protein. | Thioesterase family protein. | 0.490 |
SAY51791.1 | mlaA | SAMEA3174300_01709 | SAMEA3174300_01710 | NTP binding protein. | Putative VacJ-like protein. | 0.844 |
SAY51791.1 | mlaC | SAMEA3174300_01709 | SAMEA3174300_01708 | NTP binding protein. | Periplasmic transport protein. | 0.927 |
SAY51791.1 | mlaD | SAMEA3174300_01709 | SAMEA3174300_01707 | NTP binding protein. | Outer membrane transport protein. | 0.837 |
SAY51791.1 | resA | SAMEA3174300_01709 | SAMEA3174300_01713 | NTP binding protein. | Putative thioredoxin. | 0.489 |
SAY51793.1 | SAY50372.1 | SAMEA3174300_01711 | SAMEA3174300_00243 | VacJ-like protein. | Secreted protein. | 0.773 |
SAY51793.1 | SAY51791.1 | SAMEA3174300_01711 | SAMEA3174300_01709 | VacJ-like protein. | NTP binding protein. | 0.564 |
SAY51793.1 | aroG | SAMEA3174300_01711 | SAMEA3174300_01714 | VacJ-like protein. | Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.426 |
SAY51793.1 | fadM | SAMEA3174300_01711 | SAMEA3174300_01712 | VacJ-like protein. | Thioesterase family protein. | 0.908 |
SAY51793.1 | mlaA | SAMEA3174300_01711 | SAMEA3174300_01710 | VacJ-like protein. | Putative VacJ-like protein. | 0.590 |
SAY51793.1 | mlaC | SAMEA3174300_01711 | SAMEA3174300_01708 | VacJ-like protein. | Periplasmic transport protein. | 0.654 |
SAY51793.1 | mlaD | SAMEA3174300_01711 | SAMEA3174300_01707 | VacJ-like protein. | Outer membrane transport protein. | 0.499 |
SAY51793.1 | resA | SAMEA3174300_01711 | SAMEA3174300_01713 | VacJ-like protein. | Putative thioredoxin. | 0.809 |
aroG | SAY51793.1 | SAMEA3174300_01714 | SAMEA3174300_01711 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | VacJ-like protein. | 0.426 |
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