Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAY52088.1 | SAY52090.1 | SAMEA3174300_02031 | SAMEA3174300_02033 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | MJ0042 family finger-like domain. | 0.539 |
SAY52088.1 | argA | SAMEA3174300_02031 | SAMEA3174300_02032 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.645 |
SAY52088.1 | pyrE | SAMEA3174300_02031 | SAMEA3174300_02034 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.435 |
SAY52090.1 | SAY52088.1 | SAMEA3174300_02033 | SAMEA3174300_02031 | MJ0042 family finger-like domain. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.539 |
SAY52090.1 | argA | SAMEA3174300_02033 | SAMEA3174300_02032 | MJ0042 family finger-like domain. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.780 |
SAY52090.1 | pyrE | SAMEA3174300_02033 | SAMEA3174300_02034 | MJ0042 family finger-like domain. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.497 |
argA | SAY52088.1 | SAMEA3174300_02032 | SAMEA3174300_02031 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.645 |
argA | SAY52090.1 | SAMEA3174300_02032 | SAMEA3174300_02033 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | MJ0042 family finger-like domain. | 0.780 |
argA | pyrE | SAMEA3174300_02032 | SAMEA3174300_02034 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.759 |
pyrE | SAY52088.1 | SAMEA3174300_02034 | SAMEA3174300_02031 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.435 |
pyrE | SAY52090.1 | SAMEA3174300_02034 | SAMEA3174300_02033 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | MJ0042 family finger-like domain. | 0.497 |
pyrE | argA | SAMEA3174300_02034 | SAMEA3174300_02032 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.759 |