STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME98005.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (312 aa)    
Predicted Functional Partners:
SME98012.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.996
SME98018.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.990
SME97997.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.989
SMF00240.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.982
SMF10035.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.972
SMF10248.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.968
SMF42345.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
ugpC
Glycerol 3-phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.964
SMF65281.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.961
SMF42331.1
Sorbitol ABC transporter membrane protein.
 0.959
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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