STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF05800.1FecR family protein. (468 aa)    
Predicted Functional Partners:
SMF05810.1
Sensor domain CHASE2-containing protein.
 
     0.952
SMF59023.1
Sel1 repeat-containing protein.
 
     0.647
SMF66237.1
Hemolysin activation/secretion protein.
 
     0.636
SMF52749.1
Filamentous hemagglutinin.
 
     0.628
SMF83416.1
Hypothetical protein.
 
     0.626
SME96466.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.623
SME98267.1
Protein of unknown function.
  
     0.622
SMF05838.1
Protein of unknown function.
       0.617
SMF05933.1
Regulatory P domain of the subtilisin-like proprotein convertase.
    
  0.612
SMF52948.1
Filamentous hemagglutinin.
 
     0.608
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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