Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SME94584.1 | SMF21596.1 | SAMN06295900_101214 | SAMN06295900_10430 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | Ribosome-associated protein. | 0.453 |
| SME94584.1 | SMF72963.1 | SAMN06295900_101214 | SAMN06295900_11757 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.991 |
| SME94584.1 | dnaA | SAMN06295900_101214 | SAMN06295900_11758 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.903 |
| SMF21374.1 | SMF21596.1 | SAMN06295900_10414 | SAMN06295900_10430 | Ribosome-associated protein; Belongs to the UPF0307 family. | Ribosome-associated protein. | 0.402 |
| SMF21587.1 | SMF21596.1 | SAMN06295900_10429 | SAMN06295900_10430 | Multidrug resistance protein, MATE family. | Ribosome-associated protein. | 0.433 |
| SMF21596.1 | SME94584.1 | SAMN06295900_10430 | SAMN06295900_101214 | Ribosome-associated protein. | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | 0.453 |
| SMF21596.1 | SMF21374.1 | SAMN06295900_10430 | SAMN06295900_10414 | Ribosome-associated protein. | Ribosome-associated protein; Belongs to the UPF0307 family. | 0.402 |
| SMF21596.1 | SMF21587.1 | SAMN06295900_10430 | SAMN06295900_10429 | Ribosome-associated protein. | Multidrug resistance protein, MATE family. | 0.433 |
| SMF21596.1 | SMF21606.1 | SAMN06295900_10430 | SAMN06295900_10431 | Ribosome-associated protein. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.516 |
| SMF21596.1 | SMF72963.1 | SAMN06295900_10430 | SAMN06295900_11757 | Ribosome-associated protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.657 |
| SMF21596.1 | SMF82647.1 | SAMN06295900_10430 | SAMN06295900_12710 | Ribosome-associated protein. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.480 |
| SMF21596.1 | dnaA | SAMN06295900_10430 | SAMN06295900_11758 | Ribosome-associated protein. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.453 |
| SMF21606.1 | SMF21596.1 | SAMN06295900_10431 | SAMN06295900_10430 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Ribosome-associated protein. | 0.516 |
| SMF21606.1 | SMF72963.1 | SAMN06295900_10431 | SAMN06295900_11757 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.862 |
| SMF72963.1 | SME94584.1 | SAMN06295900_11757 | SAMN06295900_101214 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | 0.991 |
| SMF72963.1 | SMF21596.1 | SAMN06295900_11757 | SAMN06295900_10430 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribosome-associated protein. | 0.657 |
| SMF72963.1 | SMF21606.1 | SAMN06295900_11757 | SAMN06295900_10431 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.862 |
| SMF72963.1 | dnaA | SAMN06295900_11757 | SAMN06295900_11758 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.998 |
| SMF82647.1 | SMF21596.1 | SAMN06295900_12710 | SAMN06295900_10430 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Ribosome-associated protein. | 0.480 |
| dnaA | SME94584.1 | SAMN06295900_11758 | SAMN06295900_101214 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. | 0.903 |
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