STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF40421.1Glycolate oxidase. (499 aa)    
Predicted Functional Partners:
SMF40406.1
Glycolate oxidase FAD binding subunit.
 
 0.971
SMF40394.1
Glycolate oxidase iron-sulfur subunit.
 
 0.968
SME94225.1
Glycolate oxidase iron-sulfur subunit.
 
 0.901
SMF45810.1
Glutamate synthase (NADH) large subunit.
   
 0.796
SME94232.1
Glycolate oxidase FAD binding subunit.
 
0.790
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.774
SMF40355.1
Glc operon protein GlcG.
 
  
 0.763
SME93042.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.721
SMF54002.1
Allosteric NADP-dependent malic enzyme; Belongs to the malic enzymes family.
  
 
 0.721
SMF38038.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.710
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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