STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF36985.1D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (161 aa)    
Predicted Functional Partners:
SMF52542.1
Phosphoheptose isomerase.
  
 0.991
SMF22776.1
D-alpha,beta-D-heptose 7-phosphate 1-kinase.
   
 0.983
SMF39706.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
  
 0.981
hldD
ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
 
 0.963
SMF00070.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
  
 0.947
SMF30883.1
D,D-heptose 1,7-bisphosphate phosphatase.
  
 0.929
SMF30914.1
Lipopolysaccharide heptosyltransferase II.
  
 0.878
SMF30992.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.855
SMF41165.1
Heptosyltransferase-2.
 
  
 0.852
SMF74500.1
Heptosyltransferase-3.
 
 
 0.847
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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