STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF52082.1Flagellar motor switch protein FliG. (331 aa)    
Predicted Functional Partners:
SMF51994.1
Flagellar motor switch protein FliM.
 
 0.999
SMF52068.1
Flagellar assembly protein FliH.
 
 0.999
SMF52097.1
Flagellar M-ring protein FliF.
 0.999
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.998
SMF51770.1
Flagellar basal-body rod protein FlgG.
 
 
 0.997
SMF51813.1
Flagellar protein FlgJ.
 
  
 0.995
SMF51982.1
Flagellar motor switch protein FliN/FliY.
 
 0.995
SMF52019.1
Flagellar hook-length control protein FliK.
 
  
 0.993
SMF51839.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.992
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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