STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF58104.1L-lactate dehydrogenase complex protein LldE. (292 aa)    
Predicted Functional Partners:
SMF58118.1
L-lactate dehydrogenase complex protein LldF.
 0.999
SMF14400.1
Iron-sulfur cluster-binding protein.
 0.996
SMF58110.1
L-lactate dehydrogenase complex protein LldG.
 
 
 0.984
SMF21744.1
L-lactate dehydrogenase complex protein LldG.
 
 
 0.959
SMF58125.1
Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.762
SMF45810.1
Glutamate synthase (NADH) large subunit.
    
 0.731
SMF00483.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.723
SMF40355.1
Glc operon protein GlcG.
  
  
 0.719
SMF36017.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.717
SMF54010.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.717
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.