STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF63436.1Amino acid ABC transporter membrane protein 2, PAAT family. (216 aa)    
Predicted Functional Partners:
SMF63440.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.996
SMF63428.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.993
SMF55719.1
L-glutamine-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.984
SMF59702.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.984
SMF63433.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  
 
0.974
SMF15583.1
Polar amino acid transport system ATP-binding protein/glutamate/aspartate transport system ATP-binding protein.
 0.959
SMF81047.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.959
SME93435.1
L-glutamate ABC transporter ATP-binding protein.
 0.958
SME97141.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.958
SMF55734.1
L-glutamine ABC transporter ATP-binding protein.
 0.958
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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