STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF75041.1Hemoglobin. (140 aa)    
Predicted Functional Partners:
SMF75034.1
Putative ABC transport system permease protein.
 
     0.716
SMF55151.1
PAS domain S-box-containing protein.
    
  0.668
SMF75027.1
Protein of unknown function.
  
    0.646
SMF24839.1
Multi-sensor hybrid histidine kinase.
    
  0.568
SME94293.1
Nitric oxide dioxygenase; Belongs to the globin family.
 
  
 0.507
cheD
CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
    
  0.472
SMF75019.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
    
  0.452
SMF70861.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
  
 0.427
SMF81490.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
  
 0.427
SMF75056.1
Uncharacterized conserved protein, DUF924 family.
       0.426
Your Current Organism:
Trinickia caryophylli
NCBI taxonomy Id: 28094
Other names: ATCC 25418, Burkholderia caryophylli, CCUG 20834, CFBP 2429, CFBP 3818, CIP 105770, DSM 50341, HAMBI 2159, ICMP 512, JCM 10488, JCM 9310, LMG 2155, LMG:2155, NCPPB 2151, Paraburkholderia caryophylli, Phytomonas caryophylli, Pseudomonas caryophylli, Pseudomonas caryophyllii, T. caryophylli
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