node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lxx12800 | Lxx12810 | Lxx12800 | Lxx12810 | Conserved hypothetical protein; Identified by sequence similarity. | Carbomycin resistance ATPase; Identified by sequence similarity. | 0.796 |
Lxx12810 | Lxx12800 | Lxx12810 | Lxx12800 | Carbomycin resistance ATPase; Identified by sequence similarity. | Conserved hypothetical protein; Identified by sequence similarity. | 0.796 |
Lxx12810 | rplC | Lxx12810 | Lxx20330 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.660 |
Lxx12810 | rplD | Lxx12810 | Lxx20320 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.679 |
Lxx12810 | rplM | Lxx12810 | Lxx20030 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.666 |
Lxx12810 | rplR | Lxx12810 | Lxx20180 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.659 |
Lxx12810 | rplU | Lxx12810 | Lxx08040 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.671 |
Lxx12810 | rplX | Lxx12810 | Lxx20220 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.690 |
Lxx12810 | rpmH | Lxx12810 | Lxx25280 | Carbomycin resistance ATPase; Identified by sequence similarity. | 50S ribosomal protein L34; Identified by sequence similarity; Belongs to the bacterial ribosomal protein bL34 family. | 0.660 |
Lxx12810 | rpsC | Lxx12810 | Lxx20270 | Carbomycin resistance ATPase; Identified by sequence similarity. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.721 |
Lxx12810 | rpsO | Lxx12810 | Lxx08990 | Carbomycin resistance ATPase; Identified by sequence similarity. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.667 |
rplC | Lxx12810 | Lxx20330 | Lxx12810 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Carbomycin resistance ATPase; Identified by sequence similarity. | 0.660 |
rplC | rplD | Lxx20330 | Lxx20320 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
rplC | rplM | Lxx20330 | Lxx20030 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplR | Lxx20330 | Lxx20180 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplC | rplU | Lxx20330 | Lxx08040 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplC | rplX | Lxx20330 | Lxx20220 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
rplC | rpmH | Lxx20330 | Lxx25280 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L34; Identified by sequence similarity; Belongs to the bacterial ribosomal protein bL34 family. | 0.993 |
rplC | rpsC | Lxx20330 | Lxx20270 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplC | rpsO | Lxx20330 | Lxx08990 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |