STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_1243Retinal pigment epithelial membrane family protein. (268 aa)    
Predicted Functional Partners:
KU46_1242
Retinal pigment epithelial membrane family protein.
 
     0.969
KU46_1245
HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, IB family protein.
 
     0.802
KU46_167
Zinc-binding dehydrogenase family protein.
  
  
 0.578
KU46_1232
Hypothetical protein.
  
     0.545
KU46_1241
Integrase core domain protein.
       0.538
KU46_1761
FAD binding domain protein.
  
   
 0.513
KU46_1247
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
   
 0.444
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.